Università degli Studi di Milano Dottorato di Ricerca in Medicina Molecolare e Traslazionale 29 Settembre 2015 Aula Magna, settore didattico, Palazzo LITA, via F.lli Cervi 93, 20090 Segrate Dalle 10.45 alle 12 :Nanotechnology and proteomics: better diagnostics and better therapeutics in the era of personalized medicine Relatrice : Dr.sa Alessandra Luchinia a Center for Applied Proteomics and Molecular Medicine - George Mason University a seguire discussione Dalle 12.15 alle 13.00: Nanoparticle enhanced urinary antigen test for the detection of Lyme Borreliosis Relatore : Dr. Ruben Magni a a,b Center for Applied Proteomics and Molecular Medicine - George Mason University, bMMT PhD Student Università di Milan a seguire discussione Studenti, dottorandi e colleghi sono invitati a partecipare numerosi Organizzazione a cura di Cristina Battaglia La partecipazione è aperta e gratuita. Per informazioni : [email protected] Palazzo LITA, Via F.lli Cervi, 93 – 20090 Segrate, Italy Tel +39 02 503 40421; e-mail :[email protected] Università degli Studi di Milano Dottorato di Ricerca in Medicina Molecolare e Traslazionale Nanotechnology and proteomics: better diagnostics and better therapeutics in the era of personalized medicine Alessandra Luchini Abstract: Many low abundance biomarkers for early detection of cancer and other diseases are invisible to mass spectrometry because they exist in body fluids in very low concentrations, are masked by high abundance proteins such as albumin and immunoglobulins, and are very labile. To overcome these barriers, we created porous, buoyant, hydrogel nanoparticles containing novel high affinity (K D <10-13 M) chemical baits for protein and peptide harvesting, concentration, and preservation in body fluids. Particles are mixed with body fluids and target analytes are captured with high affinity by baits immobilized in the particles. The nanoparticles can achieve a 10,000 fold effective amplification of the analyte concentration, enabling mass spectrometry (MS) discovery of candidate biomarkers that were previously undetectable. This nanotechnology was applied to a unique collection of plasma samples (case-control study nested in the Physician Health Study) in order to identify biomarkers that predict the risk of Non-Small Cell Lung Cancer (NSCLC). The nanoparticles are currently used for novel high sensitivity urinary antigen tests for tuberculosis, Chagas disease and Lyme disease. We use the same high affinity, organic dyes as “molecular paints” for a new method to identify “hot-spots” of protein-protein interaction that constitute important drug targets. Our chemistry employs a new principle of solvent exclusion to functionally identify residues in hot-spot regions that are most tightly associated. The surface of native preformed protein-protein complexes in solution is rapidly coated by the paint chemistries that are administered in a pulse. Following processing for mass spectrometry, only the solvent inaccessible residues of the preformed complex emerge from the tryptic peptide sequence. We use this chemistry to sequence hot-spot domains between the three-way interaction of IL1b ligand, its receptor IL1R1, and the accessory protein IL1RAcP and use this information to create a novel hot-spot mimic peptides and monoclonal antibodies that block the interaction, and suppress IL1b cell signaling. Palazzo LITA, Via F.lli Cervi, 93 – 20090 Segrate, Italy Tel +39 02 503 40421; e-mail :[email protected]